Insertion junction: CLIP2.014260_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014260
Chromosome:chromosome 8
Location:236615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358560 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTACCCCAGCACTTGACGCGCTTTGTGGTCTCCGTGATTGCACATAT
Internal bar code:GTGATGGGAATTCCCGAAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:760
LEAP-Seq percent confirming:51.8519
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTTCAGCTTCCCTTGG
Suggested primer 2:GGACTGAGTACGTGCACACA