Insertion junction: CLIP2.014260_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014260
Chromosome:chromosome 8
Location:236949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358560 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCACCGCCAGTTTCCCCCTACCTCCAGTCGTGCCCGCGCCCAATCAAT
Internal bar code:GTTCGGTGGATGTAGGGCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:900
LEAP-Seq percent confirming:16.0494
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTGAGTACGTGCACACA
Suggested primer 2:CTCCCTTCAGCTTCCCTTGG