Insertion junction: CLIP2.014267_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014267
Chromosome:chromosome 17
Location:5572835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739650 MAE1,MFT1 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCAAATAAACCTGCAGATGCTCGCGGCATTGGCGACGGACCCGATTG
Internal bar code:GGTCTTTAGATGTAAACAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:284
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGGTGGCTGTGTTGAAG
Suggested primer 2:AAGGGGGTTCGTGCATTAGG