Insertion junction: CLIP2.014268_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014268
Chromosome:chromosome 7
Location:5857540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353750 MMP10 Metalloproteinase of VMP family; (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGATGGCAAGGGCGGCTGGGCGGTGCGCCTAGAGAACTGCAGGTGC
Internal bar code:ATGTTATACGAGGACTGATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:709
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGAAGAGGGACCTGGA
Suggested primer 2:AGGCGGACAAGAATGGGAAG