Insertion junction: CLIP2.014270_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014270
Chromosome:chromosome 9
Location:3283934
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395102 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGCCAAGCCGGCGTCATCGCGGCCGCCGCCACAGCTCGGCGGCAGT
Internal bar code:CTTGATCTTCTCTGGGTACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1114
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TAACGTCTTGGACCTTGGCC
Suggested primer 2:CTACGACTGACCGCAGCTAG