Insertion junction: CLIP2.014272_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014272
Chromosome:chromosome 10
Location:4059386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g447800 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCCAGATAACCCCAGAACACATCAAGCATCGCTTAGGAGTTAGCATA
Internal bar code:TTGGTCCTCGCGGAAGGGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTCAAACCAATGCAGCC
Suggested primer 2:TGACGAGAGGGTGCAAACTC