Insertion junction: CLIP2.014278_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014278
Chromosome:chromosome 9
Location:4582274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401367 (1 of 1) PTHR15189:SF7 - BRCA1-A COMPLEX SUBUNIT BRE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCAAGCTGCTGGAGCCCCCACACTGCCACGGAAACCGCCCCTTCAGG
Internal bar code:GGCTGTCCCGGTTGCCCTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:744
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCATACCATCAGCGCGTA
Suggested primer 2:AACACATTGCATGCACGCTT