Insertion junction: CLIP2.014326_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014326
Chromosome:chromosome 16
Location:1157849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650300 HTR39,HTR25 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCTGAGCAATCTCGCGGACCAGGCGCTGGAACGGCAGCTTGCGGATG
Internal bar code:ACGTCACCATGAAAGGCCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1883
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTAAGTGACCGAGTCGC
Suggested primer 2:GCAATACGCCATGTCAGCTG