Insertion junction: CLIP2.014331_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014331
Chromosome:chromosome 16
Location:6005340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678450 Glycosyl transferase; (1 of 2) PTHR10859//PTHR10859:SF50 - GLYCOSYL TRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGCAGCGGCTGCGGCGCCCGCGGGCGTGTGCGCATGCGGCAGGACCG
Internal bar code:AGAAGCACCACTCCTTAGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1356
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCCATGAGCCATCAATG
Suggested primer 2:ACCTTCAACAACTGGGCCAA