Insertion junction: CLIP2.014336_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014336
Chromosome:chromosome 16
Location:3748196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683793 (1 of 1) K14843 - pescadillo (PES1, NOP7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGGGAAAAGTCTGGCGGCGTGTTGGGCTGAGCCAGGCGCGACCCGAG
Internal bar code:CAGATGCAAACCACTGATGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:357
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAAGCGCGGTTGCCATAG
Suggested primer 2:ATGGTGTGCTGGGGTAGTTG