Insertion junction: CLIP2.014350_5

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014350
Chromosome:chromosome 16
Location:1137380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649900 HTR40,HTR24 Histone H3; (1 of 35) K11253 - histone H3 (H3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTTCTGAGCACAGGGCGCCGGGCTTTGTGCGCCTAGGCAAGCCCCCT
Internal bar code:CTGTAGGCCGATGCGAGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2267
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGGAACGTCTTCAGCAC
Suggested primer 2:TACCAGCTACCCCCTAACCC