Insertion junction: CLIP2.014352_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014352
Chromosome:chromosome 7
Location:3255140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334300 TRP6 Transient receptor potential ion channel protein; (1 of 2) PTHR22847//PTHR22847:SF442 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATCAATGCAGCCTCATGTCACATACGGTAGTCGCCTTTGTCCATACAA
Internal bar code:TTCTATGGATTCGAAAAAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCAGCTATGGCAAGACA
Suggested primer 2:GATGAGCTGCTGATCGACGA