Insertion junction: CLIP2.014373_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014373
Chromosome:chromosome 16
Location:798852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801882 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACACGCCGTCACCATGCCGCCAGACCGCCCCTTTTGCCGCACTGTCT
Internal bar code:ACCGAGCTCATATATTCGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2044
LEAP-Seq percent confirming:96.1039
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGACGTCCGACTTGACAC
Suggested primer 2:TTCATGCCATTGGGTAGCGT