Insertion junction: CLIP2.014390_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014390
Chromosome:chromosome 1
Location:4677132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032400 (1 of 1) PF05118 - Aspartyl/Asparaginyl beta-hydroxylase (Asp_Arg_Hydrox) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTTTGGGTGGGTTTTGTAAAATGAGCACAAGGAAAACAATAAGCTCA
Internal bar code:CAACCAGTACGTAAGCTCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAGCCTCAGACCCGTAC
Suggested primer 2:TCTTCCCTGGCGACTTTGAC