Insertion junction: CLIP2.014395_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014395
Chromosome:chromosome 5
Location:2701003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre36.g759697 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCATAGAGAATGCTGAAAGATTGATGTGACATGATATGGTATGCTA
Internal bar code:CTCGCGTTAGATTGTGCCCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATTATTGAGCACGCACACGC
Suggested primer 2:TATGTCACAGCGGTATCGGC