Insertion junction: CLIP2.014403_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014403
Chromosome:chromosome 4
Location:2435377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221650 TOP4 (1 of 1) PTHR10169//PTHR10169:SF48 - DNA TOPOISOMERASE/GYRASE // DNA GYRASE SUBUNIT A, CHLOROPLASTIC/MITOCHONDRIAL-RELATED; Topoisomerase type IV intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAATAAACATGCATGTTACTCCATACGGTATACACCCCCGCAGCCGC
Internal bar code:GGCCAGAGCGTTGAATGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1996
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGAACATGTTAGCGCG
Suggested primer 2:CCCCAGTGTGAAGCATGAGT