Insertion junction: CLIP2.014407_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014407
Chromosome:chromosome 3
Location:3425033
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166800 (1 of 1) PTHR10877//PTHR10877:SF130 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCAGCGCCTGCTCCACACGCGCCGAGACAGCTGCGTCCAGCTCCTCC
Internal bar code:GGTTTCTACCACGCCTTCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1534
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGACAGTACGTTGGCTGG
Suggested primer 2:TGCTCCAGGTTACTCGCAAG