Insertion junction: CLIP2.014414_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014414
Chromosome:chromosome 12
Location:4366144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801409 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGAAGCGTGTGCGGATATGTATGTGACTGCTGTGTGGCGGCGGGTGC
Internal bar code:TGGGCTTTGATTGGTTGGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTGCAGTCCCAAAACCA
Suggested primer 2:GCACTCTCCCCACCAGTTAC