Insertion junction: CLIP2.014431_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014431
Chromosome:chromosome 7
Location:4929587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346698 PHC75 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Putative pherophorin-chlamydomonas homolog intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGATTTCAGTCTCCGACGCACCTAGCTACCCAATGCCGTATCTTGTC
Internal bar code:TGCCCGCATTTCGATGTATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:545
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGGCTGAGACGATTCGT
Suggested primer 2:CTCTCGCTCATCCACGTACC