Insertion junction: CLIP2.014439_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014439
Chromosome:chromosome 2
Location:5738187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116650 (1 of 7) 3.5.1.52 - Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase / N-oligosaccharide glycopeptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGACGTGGACTCACCGCGCAGCTCGCCGTGAGCGAACAGCACCCCCAA
Internal bar code:TGTGATTTGGTCTAGGCCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2675
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCTTCGCCTGTGTTCTA
Suggested primer 2:GGTCAGTCATGGGGCATTCA