Insertion junction: CLIP2.014442_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014442
Chromosome:chromosome 3
Location:8000822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201850 SRH10 (1 of 2) K10877 - DNA repair and recombination protein RAD54B (RAD54B); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCATGGCGGGCTGACAGCGCTGTGGGCGGCGCCGTTCCTGGCGCGCA
Internal bar code:GCAGACCGCAGATGGGGCTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:721
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTGTCAAAGCGTGTGC
Suggested primer 2:TGTTTTGGTGGAAAGGCCCT