Insertion junction: CLIP2.014445_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014445
Chromosome:chromosome 17
Location:4202630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729350 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED outside_mRNA
Cre17.g802080 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGCCGCTGAGCTCGGCGGTGGCCATGGCGCTGCGGCAGCGCGAGGA
Internal bar code:GAACATATGACACAATAGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:967
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAAAGCCTTGGCCCATC
Suggested primer 2:TTTGGTTGGCTGGTCTGGTT