Insertion junction: CLIP2.014458_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014458
Chromosome:chromosome 3
Location:1606341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152500 (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTCACCCGGCTTGCCTGCAGGAGAGCAGCAGCTCCCCTGGACTGAGC
Internal bar code:CCATCAGCTTAGCTTACAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGAGGAGGAGCAGAAGG
Suggested primer 2:AGCTCTGCAAGGCCGATATC