Insertion junction: CLIP2.014460_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014460
Chromosome:chromosome 8
Location:3807498
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381300 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCACTTGCAATTGACCGTGATGTGGCCATAGTAGCTCTTGACCGCAC
Internal bar code:TCTATGCTCCCCTGTTCCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2155
LEAP-Seq percent confirming:25.3521
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAACCCTGTCCCATCAC
Suggested primer 2:CCGTCAGCCTCATCCTCATC