Insertion junction: CLIP2.014462_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014462
Chromosome:chromosome 13
Location:2844500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583050 Tic55-like5,TIC55-5,PAO8 Pheophorbide a oxygenase-related protein; (1 of 3) K13071 - pheophorbide a oxygenase (PAO, ACD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTAAGAACATGGTAGACGGGAGAAGGGCGATAGAGAAATGGGCACCAA
Internal bar code:CCTTGTACTCGTCTTCATTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCTTCCCCAGCCTCTAC
Suggested primer 2:TCAAGCTTCGTCTGAGCAGG