Insertion junction: CLIP2.014464_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014464
Chromosome:chromosome 8
Location:4054845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382800 CDPK13 (1 of 1) PF00036//PF07714//PF13499 - EF hand (EF-hand_1) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATCCGGGGCTGGCCTAGAGGGTACTGGCAACCACCCATGTGGGTCA
Internal bar code:TTCTCGTCAATAGCATACTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:917
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGGGGATGGTCTTCACC
Suggested primer 2:AGCGGTTATCGGAGCATCTG