Insertion junction: CLIP2.014464_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014464
Chromosome:chromosome 8
Location:4054845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382800 CDPK13 (1 of 1) PF00036//PF07714//PF13499 - EF hand (EF-hand_1) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACCCGGGCACGAGGCCAACGCTGCGCTTGGCGCGGCGCGACACAGCCT
Internal bar code:AGTTAATGAAATGAGCGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2844
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGTTATCGGAGCATCTG
Suggested primer 2:CCTTGGGGATGGTCTTCACC