Insertion junction: CLIP2.014467_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014467
Chromosome:chromosome 3
Location:2580025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160100 (1 of 1) K06889 - uncharacterized protein (K06889) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGTGGATGGGACCCGTCGGCCATACTTGGGCCTGGCGCCGAGCCTTA
Internal bar code:TGTCGTCGATCTGCGTAGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1907
LEAP-Seq percent confirming:95.5752
LEAP-Seq n confirming:108
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTACCTGGTCTGGTCAAC
Suggested primer 2:GCCAGGCACAAAAGGACTTG