Insertion junction: CLIP2.014473_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.014473
Chromosome:chromosome 8
Location:368209
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358576 (1 of 29) PF13637 - Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTACGTAGCATGCCCCTTGAATGCAATTGTGAAGGCAACCCGCATTCCC
Internal bar code:TGCATAGTCACTTGTCTCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1550
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTCCAACAAACGCCTG
Suggested primer 2:CTCTCGATTCCGTGCGTGTA