Insertion junction: CLIP2.014478_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014478
Chromosome:chromosome 3
Location:1175494
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149350 RWP4 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATCATAGTAGAGATGGGCGGCCCCACGGGACTGATCATCATCGGCGC
Internal bar code:GTAGGGGGGCAGGACAGAAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCACAGCACTTGCAGCAAAC
Suggested primer 2:TGTGACTGCTGTTGTCGGAA