Insertion junction: CLIP2.014478_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014478
Chromosome:chromosome 3
Location:1175496
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149350 RWP4 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAACCACCAGCAGCAGCAGACGCTGCGTCCCCCCTCCGTGCCGCCGAT
Internal bar code:GGTCTTGATCTACGAGATATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4140
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACTGCTGTTGTCGGAA
Suggested primer 2:TCACAGCACTTGCAGCAAAC