Insertion junction: CLIP2.014488_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014488
Chromosome:chromosome 10
Location:5387818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457100 (1 of 1) 1.13.11.79 - 5,6-dimethylbenzimidazole synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTAATACTGCACCGCCGGCTCCCTCACATTGCCTGACGCCCGCGCA
Internal bar code:ATGGTTAAAAGGTTTTGCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2144
LEAP-Seq percent confirming:98.6111
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AATCATGTTCCGTCCTGCGT
Suggested primer 2:ACCAGTAAACGGACAGGCTG