Insertion junction: CLIP2.014498_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014498
Chromosome:chromosome 17
Location:2291674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713400 HTA31,HTA22,HTA25 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCCTTGCCGCGACCAGCCATTGTATCGAGTGGGGGGTTCTTGGAGA
Internal bar code:CTAAGTATGGGGAATGGCGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1663
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCGGCTCAGCTTAGAGG
Suggested primer 2:TTTCTGGGAAGGACCGAAGC