Insertion junction: CLIP2.014504_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014504
Chromosome:chromosome 16
Location:3096484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664700 SHY1 (1 of 1) K14998 - surfeit locus 1 family protein (SURF1, SHY1); Cytochrome c oxidase assembly protein, Surfeit 1-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCACCCGTACCGCGGCCCCCCAACGCAACCAGCCACGCCCTGCGCAG
Internal bar code:TCCAGTCTCTTGTCCCGGCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3498
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACCATAGTCGCAAGCT
Suggested primer 2:CTATTGACAGCACCCCAGCA