Insertion junction: CLIP2.014521_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014521
Chromosome:chromosome 12
Location:2783113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g503950 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGAAGTCAGCACGATGACCCGCAGACCCAAATGGACGTCGCCTAACC
Internal bar code:TAAGTCGGGGTGTTCGTTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2908
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCTACAGGCATGGCAAG
Suggested primer 2:ATAAAACCGCGCCGCATAAC