Insertion junction: CLIP2.014532_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014532
Chromosome:chromosome 16
Location:1124130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649800 PPR3,CYCR6 (1 of 1) PF02984//PF13041 - Cyclin, C-terminal domain (Cyclin_C) // PPR repeat family (PPR_2); PentatricoPeptide Repeat protein 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATGCCGGGTGTTAATGTTACGGTGTGATGTCCTTATGGAGCTGGAT
Internal bar code:GATGTCTGGAGTTAAGACCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4537
LEAP-Seq percent confirming:98.8372
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGTCTCCAGGACCTTTT
Suggested primer 2:TCGTTGTACTTCTCGCACCC