Insertion junction: CLIP2.014534_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014534
Chromosome:chromosome 3
Location:5149388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800343 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACACCGACACGACACGCCCACTCCTCCCCTGCTTCCCGCCGACCCAA
Internal bar code:TTAGCGTAAATATCACCATCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1880
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTATTACCAAGCAGGCGC
Suggested primer 2:CATGCAAACAACTCACCGCA