Insertion junction: CLIP2.014539_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014539
Chromosome:chromosome 17
Location:1059957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703600 BUG11,OFD1 Oral-facial-digital syndrome basal body protein 1; (1 of 1) PTHR15431:SF5 - ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGATGCAGGGCCGCTCTGGTGTTGGTGTCCGGATGCGCCGCCACTGCT
Internal bar code:TTAAAGAAACAGTGTCGAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:367
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCCGGCACTTCCAGATG
Suggested primer 2:TGCTTTCGCTGCTGTTCAAC