Insertion junction: CLIP2.014543_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014543
Chromosome:chromosome 4
Location:1852474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218000 MOC1 Monokaryotic Chloroplast1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGAATGTAACCCCCCGCACCTCAGAATGGGCTGCTGCCCCGGGAACA
Internal bar code:TATACAAATAGGCTTGGCTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:244
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCACGACTGTTTCCGTA
Suggested primer 2:GGGTAAGAGCGTTGGGAACA