Insertion junction: CLIP2.014550_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014550
Chromosome:chromosome 1
Location:3811295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024900 (1 of 1) PTHR10501:SF19 - RNA-BINDING REGION RNP-1 DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACAACTCCCAGGAAGCGACCCAGAATGACCTGAAGTTGCCTCACCGT
Internal bar code:CGGGCGGTTTGTCGTTAAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:933
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACATAGGACAACGCAGCACA
Suggested primer 2:CTGTTGCTGTTGTTGCTGCT