Insertion junction: CLIP2.014554_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014554
Chromosome:chromosome 9
Location:1824725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397900 (1 of 1) PTHR21347:SF0 - CLEFT LIP AND PALATE TRANSMEMBRANE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTACAGAATGCTGGAAGGAGGCAACATGACGTAGGCAGATTGACGGAA
Internal bar code:TCTTTAGGATTCATTGTAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3418
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CCTATGCGACGTAGGTGACC
Suggested primer 2:TAAGTAGCGGGACTGAGCCT