Insertion junction: CLIP2.014558_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.014558
Chromosome:chromosome 7
Location:2027049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325700 SRH15 SNF2-related DNA/RNA helicase; (1 of 1) PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAAGAGGAGAGGCACTGGTTATGTGTGGTTTGGGGTGGCGGGGAGGT
Internal bar code:TCGGAGGGTTTTATTCCGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:718
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGATGAGGAGTTTGCAA
Suggested primer 2:CGTATGTGTGTGCGCGTAAG