Insertion junction: CLIP2.014561_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014561
Chromosome:chromosome 14
Location:2684307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801640 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTAGATTTTGTGGCCACGCCCCTTCGGTACCGCCTGCTGGACTTCCTG
Internal bar code:GCTTACAACCATTGGACGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2516
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAACATGCAAACAGGGCG
Suggested primer 2:TGGTCGAACGCTGGAGTTAC