Insertion junction: CLIP2.014566_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014566
Chromosome:chromosome 4
Location:1959499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218850 RNP (1 of 1) K14846 - ribosome production factor 1 (RPF1); Putative small nucleolar ribonucleoprotein U3 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCTCAGCTTCCCCCTTGTTCAGCTTTGCCTGCTGCCCGCTACACCCC
Internal bar code:GTGTCACTATGCCGGTCTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:324
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCAATGAGCCTCATGAA
Suggested primer 2:CGCCGGAAAAAGCAAAAGGA