Insertion junction: CLIP2.014574_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.014574
Chromosome:chromosome 9
Location:1239856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400850 CTL4 (1 of 1) PTHR10877//PTHR10877:SF139 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; carbohydrate-binding protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGAGAGCATGGTGCACTGCGTGCCCGAGGCACTGGTAAGGCTGCATG
Internal bar code:AACGAAATCTCGTATGCGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2426
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCGTATGTGTGACTGCA
Suggested primer 2:TGCCCACTTGCATACCTCTG