Insertion junction: CLIP2.014583_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.014583
Chromosome:chromosome 6
Location:2384451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268450 (1 of 1) PTHR22850//PTHR22850:SF85 - WD40 REPEAT FAMILY // WD-40 REPEAT-CONTAINING PROTEIN MSI4-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGCAATCAATCGCAATCCCGTTCCCCCGACGCGCCTGCTATGCCGCT
Internal bar code:TGATTCATCGCCGTGAGCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:164
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCACCCCTCCTTCTCCTC
Suggested primer 2:TCCTGCCTCATCCCATACCA