Insertion junction: CLIP2.014591_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.014591
Chromosome:chromosome 12
Location:8248547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551550 (1 of 1) PF00098//PF02689//PF05970//PF13604 - Zinc knuckle (zf-CCHC) // Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) // AAA domain (AAA_30) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGACCCCCACCCGCTCGCCTGCTCACCCCTTGCTCCCCACCCCCCCAC
Internal bar code:TGAAGTGGGATGCACATATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:49
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGAGGAGGGGGTGATTG
Suggested primer 2:CGTCCTTGTCTCCGAGATCG