Insertion junction: CLIP2.014592_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.014592
Chromosome:chromosome 15
Location:913722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640101 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGATCACACAATCACAATCACACGGACAGGCCTGGCGGCGCTGTCC
Internal bar code:TTTGAGTATGTCCCTTCACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1274
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCGGACAAGGGCTCTGTT
Suggested primer 2:GGATGTGCGACTGGAGGAAA