Insertion junction: CLIP2.014610_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.014610
Chromosome:chromosome 1
Location:2259505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012650 KCN9 (1 of 4) IPR000595//IPR002110//IPR005821//IPR018490//IPR020683 - Cyclic nucleotide-binding domain // Ankyrin repeat // Ion transport domain // Cyclic nucleotide-binding-like // Ankyrin repeat-containing domain; Voltage-gated potassium channel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTGCGCTCGTCGCCCTTCACCACCAGCATGGTGACCGTGCCCAGAA
Internal bar code:TAGGGACTGGCTTGTGCAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACATTCCTTCCGAACGCT
Suggested primer 2:CGCAGAACATTCCGCTCATG