Insertion junction: CLIP2.014614_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.014614
Chromosome:chromosome 7
Location:5618388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352300 (1 of 3) 2.1.1.200 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase / TrMet(Xm32) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGATCTTTGCTCGCGCTCCCGTACGCACTCTTGGCGGCTGACAGCGTG
Internal bar code:TTCCTGACCCATCAACCCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGGGTGCCATGTGACTC
Suggested primer 2:TGCAAGGTTGGCAGCAATTC